Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872430.1_cds_XP_016434789.1_30812
CDS Infomation

[gene=LOC107761131] [db_xref=GeneID:107761131] [protein=squalene epoxidase 3-like] [protein_id=XP_016434789.1] [location=join(68801..69268,70196..70307,70522..70696,70847..71015,71195..71419,71591..71866,72313..72591,72924..73040)] [gbkey=CDS]
Sequence

ATGCTGCTTATAAATACTCCCAACAATATATCTTTCTCCCTCGTCTTCTCCAAACACAAA
TTTCCTGTGTCAACAAACCAAACACCCCCACAATTATCTCAGCCCTCTGCTTCAAGTACA
AAGAAAAAATTAGCCTTGATCTCTTTTTCCAAATATTTGCGAAATACACAGCTCCAATTT
ATCTCTACCAACGAGAAAATGGTGAATTTCATGATGGATAAATATATTGTCCCCACTTTC
TTTGTTTCTTTATTGGGGTTCCTTCTTCTTTATATTTTGCGACCTAGATTTAGAACTCCC
TATTACAAGAAAAAAGACCCTAAATCCATCCAAAAATGTGAAACCCACAATGTGATTTCT
AGCAATTTAATCAATGGTGAATGCAAATTGGAAAAAGGGTCCGACGCTGATATCATCATT
GTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCCAAGGAAGGGCGAAAA
GTTCTTGTACTTGAAAGGGATTTGACAGAGCCCGACCGGATTGTTGGCGAGTTGCTACAG
CCTGGAGGTTATCTGAAATTGATTGAGTTGGGCCTTGAAGATTGTGTTGAGGATATTGAT
GCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGGAAAAGCACAAACGTTTCCTAT
CCCTTGGAAAATTTCCATTCTGATGTGGCTGGGAGAAGCTTTCACAATGGGCGTTTCATA
CAAAAGATGAGAGAAAAAGCAGCTACTCTTCCCAATGTACGATTGGAGCAAGGCACTGTA
ACATCCCTGATTGAAGAAAATGGATCCGTTAAGGGTGTCCAGTACAAAACGAAGGCTGGT
CAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGATGCTTTTCAAACTTG
CGACGCTCGCTTTGCAACCCTAAGGTTGATATTCCCTCTTGTTTTGTTGGTTTGGTATTG
GAGCTAGAGAATGATCAACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCT
TCGCCCATCTTATTTTATCCTATTAGTAGCACGGAAATCCGCTGCTTGGTCGATGTGCCT
GGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAGACTATGGTG
GCTCCCCAGGTCCCACCTGAGCTACATGATGCGTTTATAACTGCAATTGATAAGGGGCAT
ATTAGAACTATGCCAAATAGGAGCATGCCAGCTGCTCCGTATCCTACCCCTGGAGCTCTG
TTACTTGGTGATTCTTTCAACATGCGCCATCCTTTAACTGGTGGGGGAATGACTGTAGCG
CTTTCAGATATTGCAGTGTTAAGGAATCTTCTTAAGCCATTGGACAACCTGAATGATGCA
GATGAGTTATGTAAATATTTGGAGTCCTTTTATACTTTGCGCAAGCCAGTGGCTTCAACA
ATAAATACTTTGGCTGGAGCACTGTACAAGGTATTCTGTGCTTCTCCTGATCAAGCGAGG
AAGGAGATGCGAGAAGCATGTTTCGACTATTTGAGTCTTGGAGGTACTTGTTCAACAGGA
CCCGTAGCTCTACTCTCTGGTCTTAATCCTAGCCCGCTGAGCTTGGTACTCCATTTTTTT
GCTGTGGCCATATATGGAGTTGGTCGTTTACTCGTTCCATTTCCTTCCCCAAAGAGATTG
TGGATAGGAGCTAGATTAATCTCGGCTGCATCGGGCATCATATTTCCCATTATAAAAGCA
GAAGGGGTCAGGCAAATGTTCTTCCCAACAACAATACCAGCATATCACAGAGCTCCTCCA
GTAAACAAGGGGTCAGATTAA

Peptide Sequence

PEP ID

XP_016434789.1
PEP Infomation

PREDICTED: squalene epoxidase 3-like [Nicotiana tabacum]
Sequence

MLLINTPNNISFSLVFSKHKFPVSTNQTPPQLSQPSASSTKKKLALISFSKYLRNTQLQF
ISTNEKMVNFMMDKYIVPTFFVSLLGFLLLYILRPRFRTPYYKKKDPKSIQKCETHNVIS
SNLINGECKLEKGSDADIIIVGAGVAGAALAHTLAKEGRKVLVLERDLTEPDRIVGELLQ
PGGYLKLIELGLEDCVEDIDAQRVVGYALFKDGKSTNVSYPLENFHSDVAGRSFHNGRFI
QKMREKAATLPNVRLEQGTVTSLIEENGSVKGVQYKTKAGQELKAHAPLTVVCDGCFSNL
RRSLCNPKVDIPSCFVGLVLELENDQLPYPNHGHVILADPSPILFYPISSTEIRCLVDVP
GQKLPSLANGDMANYLKTMVAPQVPPELHDAFITAIDKGHIRTMPNRSMPAAPYPTPGAL
LLGDSFNMRHPLTGGGMTVALSDIAVLRNLLKPLDNLNDADELCKYLESFYTLRKPVAST
INTLAGALYKVFCASPDQARKEMREACFDYLSLGGTCSTGPVALLSGLNPSPLSLVLHFF
AVAIYGVGRLLVPFPSPKRLWIGARLISAASGIIFPIIKAEGVRQMFFPTTIPAYHRAPP
VNKGSD

Transcript Sequence

Gene sequence data has not been registered.